PPDB

The Plant Proteome Database

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AT1G72340.1   NagB/RpiA/CoA transferase-like superfamily protein

Lab Annot. NagB/RpiA/CoA transferase-like protein
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72340.2 11Arabidopsis thaliana03821001000 (0)C
AT1G72340.3 11Arabidopsis thaliana03141001000 (0)M
AT1G53900.2 11Arabidopsis thaliana039679860 (0)M
Os12g31380.1 7Oryza sativa3E-18037373800 (0)_
Os10g25320.1 7Oryza sativa1E-1818932482 (2)_
Os10g25320.3 7Oryza sativa1E-1818932482 (2)_
Zm00001eb138200_P001 agpv5Zea mays7E-18034676850 (0)_
GRMZM2G084647_P01 3.21Zea mays7E-18034676850 (0)_
v1_GRMZM2G084647_P01 4a53Zea mays7E-18034676851 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: IF-2B(1) Vta1_C(1)
TargetP: Mitochondria (Class 4 C0.208; M0.529; S0.016; _0.327)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 382 aa (-cTP 361)
Molecular Weight 42.19 kDA(-cTP )
PI 5.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help