PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G72330.1   alanine aminotransferase 2

Lab Annot. ALAAT2 (ALANINE AMINOTRANSFERASE 2); alanine transaminase
Mapman: 13.1.1.3.1 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase
Curated Location mitochondria (Pubmed: 22268146 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72330.3 11Arabidopsis thaliana0553979711 (7)M
AT1G17290.1 11Arabidopsis thaliana05448492369 (244)M
AT1G72330.2 11Arabidopsis thaliana040910010010 (9)M
Os07g42600.1 7Oryza sativa0479809132 (32)M
Os10g25130.1 7Oryza sativa0478768717 (17)_
Os10g25140.1 7Oryza sativa047964780 (0)_
Zm00001eb327530_P001 agpv5Zea mays048777900 (0)M
Zm00001eb109370_P002 agpv5Zea mays047976880 (0)M
Zm00001eb109370_P001 agpv5Zea mays047976880 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aminotran_1_2(1) Aminotran_MocR(1) Pox_A_type_inc(1)
TargetP: Mitochondria (Class 5 C0.752; M0.849; S0.001; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 540 aa (-cTP 490)
Molecular Weight 59.51 kDA(-cTP )
PI 5.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2290Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17137349(ATP-binding-mitochondria cell suspension)
20018591(strong Cu2+ binding (mitochondria - cell culture))
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help