PPDB

PPDB	The Plant Proteome Database

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AT1G72100.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein

Lab Annot.

late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Mapman: 35.1.22 not assigned.no ontology.late embryogenesis abundant domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G22600.1 11 Arabidopsis thaliana 2E-89 255 56 68 1 (1) S
AT3G62580.1 11 Arabidopsis thaliana 2E-10 169 28 45 6 (6) S
AT5G44310.2 11 Arabidopsis thaliana 7E-10 164 35 50 4 (1) C
Os11g44940.1 7 Oryza sativa 3E-11 166 30 46 0 (0) S
Os03g20680.1 7 Oryza sativa 4E-06 173 29 46 0 (0) M
GRMZM2G072322_P01 3.21 Zea mays 4E-56 596 31 43 0 (0) S
v1_GRMZM2G072322_P01 4a53 Zea mays 4E-56 596 31 43 0 (0) S
Zm00001eb422690_P001 agpv5 Zea mays 5E-56 596 31 43 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Apolipoprotein(2) CemA(2) DUF1543(2) DUF4149(2) EspB(2) LEA_4(6) Phe_tRNA-synt_N
TargetP:	Secreted (Class 2 C0.109; M0.042; S0.862; _0.064)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	3 TMs
TAT position:
Length	480 aa (-cTP 465)
Molecular Weight	52.70 kDA(-cTP )
PI	8.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2291	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data