PPDB

PPDB	The Plant Proteome Database

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AT1G71980.1 Protease-associated (PA) RING/U-box zinc finger family protein

Lab Annot.

Protease-associated (PA) RING/U-box zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G22670.1 11 Arabidopsis thaliana 6E-151 431 57 70 0 (0) S
AT4G09560.1 11 Arabidopsis thaliana 5E-123 442 49 64 0 (0) S
AT1G35630.1 11 Arabidopsis thaliana 8E-116 309 53 72 0 (0) S
Os03g07130.2 7 Oryza sativa 3E-152 429 55 68 0 (0) S
Os03g07130.1 7 Oryza sativa 3E-152 429 55 68 0 (0) S
Os03g07130.3 7 Oryza sativa 2E-148 408 56 68 0 (0) S
v1_GRMZM2G003656_P07 4a53 Zea mays 3E-142 422 55 69 0 (0) S
v1_GRMZM2G003656_P06 4a53 Zea mays 3E-142 422 55 69 0 (0) S
v1_GRMZM2G003656_P01 4a53 Zea mays 3E-142 422 55 69 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PA(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-rb
TargetP:	Secreted (Class 2 C0.014; M0.162; S0.918; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	448 aa (-cTP 433)
Molecular Weight	48.81 kDA(-cTP )
PI	9.29(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data