PPDB

 The Plant Proteome Database

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AT1G71920.1   HISTIDINE BIOSYNTHESIS 6B
Lab Annot. histidinol-phosphate aminotransferase
Mapman: 13.1.7.6 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10330.1 11Arabidopsis thaliana0417999937 (28)C
AT1G71920.6 11Arabidopsis thaliana041799990 (0)C
AT5G10330.2 11Arabidopsis thaliana0417999936 (27)C
Os02g47940.1 7Oryza sativa0358799121 (21)M
Os01g08270.1 7Oryza sativa3E-0930726440 (0)_
Os09g28050.3 7Oryza sativa7E-0924522440 (0)_
Zm00001eb252330_P001 agpv5Zea mays038576870 (0)M
v1_GRMZM2G170595_P01 4a53Zea mays0385768733 (33)M
GRMZM2G170595_P01 3.21Zea mays0385768735 (35)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Alliinase_C(2) Aminotran_1_2(1) AMP-binding(1)
TargetP: Chloroplast (Class 1 C0.957; M0.053; S0.031; _0.149)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 376)
Molecular Weight 46.36 kDA(-cTP 41.98)
PI 5.99(-cTP 5.16)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2148Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2311Detail       leaf [A. thaliana] PG plastoglobule 
2314Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

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