PPDB

The Plant Proteome Database

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AT1G71780.1   WD repeat protein

Lab Annot. unkown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g51800.1 7Oryza sativa7E-5817452716 (6)_
Os01g08950.1 7Oryza sativa3E-219947650 (0)_
Zm00001eb121890_P001 agpv5Zea mays1E-3615641640 (0)C
GRMZM2G084125_P01 3.21Zea mays1E-3615641640 (0)C
v1_GRMZM2G084125_P01 4a53Zea mays1E-3615641640 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 3 C0.283; M0.083; S0.094; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 197 aa (-cTP 195)
Molecular Weight 22.40 kDA(-cTP )
PI 9.02(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help