PPDB

PPDB	The Plant Proteome Database

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AT1G71770.1 poly(A)-binding protein 5

Lab Annot.

poly(A)-binding protein 5
Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G71770.2 11 Arabidopsis thaliana 0 682 100 100 0 (0) _
AT1G22760.1 11 Arabidopsis thaliana 0 671 71 80 5 (5) _
AT2G23350.1 11 Arabidopsis thaliana 0 635 50 65 258 (133) C
Os08g22354.2 7 Oryza sativa 0 636 53 67 34 (34) S
Os08g22354.1 7 Oryza sativa 0 636 53 67 34 (34) _
Os09g02700.1 7 Oryza sativa 0 611 55 70 51 (51) C
GRMZM2G102829_P02 3.21 Zea mays 0 612 55 69 171 (98) _
v1_GRMZM2G352129_P01 4a53 Zea mays 0 659 52 66 30 (30) S
Zm00001eb078040_P002 agpv5 Zea mays 0 659 52 66 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Limkain-b1(4) Nup35_RRM_2(3) OB_RNB(3) PABP(2) PHM7_cyt(3) RRM_1(4) RRM_3(4) RRM
TargetP:	Cytoplasm (Class 3 C0.193; M0.100; S0.157; _0.681)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	682 aa (-cTP 638)
Molecular Weight	74.42 kDA(-cTP )
PI	8.47(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data