PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G71680.1   Transmembrane amino acid transporter family protein
Lab Annot.
Mapman: 34.3 transport.amino acids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71680.2 11Arabidopsis thaliana036399990 (0)_
AT5G40780.1 11Arabidopsis thaliana042860760 (0)_
AT1G24400.1 11Arabidopsis thaliana042860770 (0)_
Os08g03350.1 7Oryza sativa044260760 (0)_
Os12g14100.1 7Oryza sativa3E-17244158740 (0)_
Os05g14820.1 7Oryza sativa1E-15943359730 (0)_
GRMZM2G149216_P01 3.21Zea mays044656730 (0)_
Zm00001eb412940_P003 agpv5Zea mays044656730 (0)_
Zm00001eb412940_P004 agpv5Zea mays044656730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aa_trans(1) DUF4231(4) Trp_Tyr_perm(2)
TargetP: Cytoplasm (Class 1 C0.064; M0.058; S0.050; _0.968)
Predotar:
Subcel. Location:
TM-HMM prediction: 9 TMs
Aramemnon: 8 TMs
TAT position:
Length 448 aa (-cTP 386)
Molecular Weight 49.79 kDA(-cTP )
PI 8.91(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help