PPDB

PPDB	The Plant Proteome Database

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AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein

Lab Annot.

nuclear transport factor 2 (NTF2) protein
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

plastid (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G71480.3 11 Arabidopsis thaliana 5E-128 179 100 100 0 (0) C
AT1G71480.2 11 Arabidopsis thaliana 8E-104 151 100 100 0 (0) C
AT5G41470.1 11 Arabidopsis thaliana 2E-32 222 29 50 0 (0) C
Os09g09320.2 7 Oryza sativa 3E-65 155 60 78 15 (15) C
Os09g09320.1 7 Oryza sativa 1E-63 155 60 78 15 (15) C
Os03g64380.1 7 Oryza sativa 5E-17 181 28 43 0 (0) C
Zm00001eb127280_P002 agpv5 Zea mays 1E-61 155 58 73 0 (0) C
v1_GRMZM2G134182_P01 4a53 Zea mays 1E-61 155 58 73 0 (0) C
GRMZM2G134182_P01 3.21 Zea mays 1E-61 155 58 73 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NTF2(1) SnoaL(1) SnoaL_2(1) SnoaL_3(1)
TargetP:	Chloroplast (Class 2 C0.858; M0.019; S0.110; _0.031)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	216 aa (-cTP 146)
Molecular Weight	23.52 kDA(-cTP 16.24)
PI	5.32(-cTP 4.70)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
105	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
107	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1127	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1650	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	m48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2029	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
18431481(chloroplast)
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data