PPDB

PPDB	The Plant Proteome Database

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AT1G71460.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18750.1 11 Arabidopsis thaliana 1E-106 597 32 53 0 (0) C
AT4G35130.1 11 Arabidopsis thaliana 2E-98 518 32 55 0 (0) C
AT3G57430.1 11 Arabidopsis thaliana 3E-97 637 31 51 0 (0) C
Os12g10184.1 7 Oryza sativa 0 671 46 64 0 (0) C
Os03g56850.1 7 Oryza sativa 1E-104 571 31 55 0 (0) M
Os09g07780.1 7 Oryza sativa 7E-97 586 31 51 0 (0) M
GRMZM2G132140_P01 3.21 Zea mays 0 662 45 64 22 (22) C
v1_GRMZM2G132140_P01 4a53 Zea mays 0 662 45 64 15 (15) C
Zm00001eb411060_P001 agpv5 Zea mays 0 662 45 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(14) PPR_1(12) PPR_2(12) PPR_3(8) PPR_long(4) TPR_14(6) TPR_4(2)
TargetP:	Chloroplast (Class 4 C0.562; M0.090; S0.008; _0.231)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	689 aa (-cTP 640)
Molecular Weight	77.49 kDA(-cTP 72.17)
PI	9.46(-cTP 9.30)

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data