PPDB

PPDB	The Plant Proteome Database

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AT1G71270.1 Vps52 / Sac2 family

Lab Annot.

POK (POKY POLLEN TUBE)
Mapman: 35.1 not assigned.no ontology

Curated Location

TAIR curated location: Golgi apparatus15235115

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G71300.2 11 Arabidopsis thaliana 0 701 88 93 0 (0) _
AT1G71300.1 11 Arabidopsis thaliana 0 747 83 88 0 (0) _
Os03g30460.1 7 Oryza sativa 0 686 77 91 11 (11) _
Os10g34680.1 7 Oryza sativa 0 680 58 76 0 (0) _
Zm00001eb393130_P003 agpv5 Zea mays 0 685 75 90 0 (0) _
GRMZM2G124239_P01 3.21 Zea mays 0 685 75 90 1 (1) _
Zm00001eb393130_P004 agpv5 Zea mays 0 591 76 91 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bac_rhamnosid(1) CK_II_beta(2) COG2(2) GnsAB_toxin(1) Sec3_C(2) SPG48(1) Vps52(1
TargetP:	Cytoplasm (Class 2 C0.137; M0.108; S0.125; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	707 aa (-cTP 702)
Molecular Weight	80.94 kDA(-cTP )
PI	5.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data