PPDB

 The Plant Proteome Database

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AT1G71260.1   WHIRLY 2
Lab Annot. Why2 - DNA binding/transcription factor -p24 like
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location mitochondria (Pubmed: 15967440 )

TAIR curated location: mitochondrion15967440
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14410.1 11Arabidopsis thaliana4E-552104063315 (212)C
AT2G02740.2 10Arabidopsis thaliana4E-541724568228 (159)C
AT2G02740.1 11Arabidopsis thaliana4E-541734669242 (173)C
Os02g06370.1 7Oryza sativa3E-7218956770 (0)M
Os06g05350.1 7Oryza sativa8E-54196416435 (35)C
Zm00001eb207760_P001 agpv5Zea mays6E-7418957760 (0)M
Zm00001eb207760_P002 agpv5Zea mays6E-7418957760 (0)M
GRMZM2G012262_P01 3.21Zea mays3E-7318957762 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Whirly(1)
TargetP: Mitochondria (Class 5 C0.203; M0.247; S0.017; _0.127)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 238 aa (-cTP 192)
Molecular Weight 26.29 kDA(-cTP )
PI 9.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2218Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2220Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2221Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2222Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2223Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2284Detail        [A. thaliana] Clp C1 WT
2285Detail        [A. thaliana] Clp C1 TRAP
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2604Detail       Rosettes [A. thaliana] Total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help