PPDB

The Plant Proteome Database

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AT1G71240.1   chromosome-partitioning protein%2C putative (DUF639)

Lab Annot. unknown protein (DUF639)
Mapman: 35.2 not assigned.unknown
Curated Location plastid nucleoid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71240.2 11Arabidopsis thaliana082499995 (4)M
AT1G71240.3 11Arabidopsis thaliana064899990 (0)M
AT1G48840.1 11Arabidopsis thaliana4E-7066828491 (1)_
Os01g64870.1 7Oryza sativa076753730 (0)M
Os02g42530.1 7Oryza sativa2E-7069328470 (0)M
Os02g42530.2 7Oryza sativa1E-6657530490 (0)_
GRMZM2G141185_P02 3.21Zea mays046557745 (5)_
v1_GRMZM2G141185_P01 4a53Zea mays6E-11730357720 (0)_
GRMZM2G141185_P01 3.21Zea mays8E-11730357720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF639(1) HCV_NS4b(1) Pex24p(1) Reticulon(1)
TargetP: Mitochondria (Class 4 C0.324; M0.544; S0.009; _0.062)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 824 aa (-cTP 772)
Molecular Weight 92.87 kDA(-cTP )
PI 9.40(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help