PPDB

 The Plant Proteome Database

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AT1G71190.1   senescence associated gene 18
Lab Annot. senescence associated gene 18
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71190.2 11Arabidopsis thaliana2E-17128185850 (0)S
AT5G11870.2 11Arabidopsis thaliana1E-8125746680 (0)M
AT5G11870.1 11Arabidopsis thaliana2E-8125247690 (0)M
Os01g73120.1 7Oryza sativa3E-14227866820 (0)S
Os01g10100.2 7Oryza sativa4E-7625147640 (0)M
Os01g10100.1 7Oryza sativa2E-3111446640 (0)M
GRMZM2G147709_P01 3.21Zea mays1E-13626869820 (0)S
v1_GRMZM2G147709_P01 4a53Zea mays1E-13626869820 (0)S
Zm00001eb362500_P001 agpv5Zea mays1E-13626869820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ceramidase(2) DUF2070(1) SID-1_RNA_chan(1)
TargetP: Secreted (Class 1 C0.001; M0.158; S0.975; _0.066)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 281 aa (-cTP 215)
Molecular Weight 32.24 kDA(-cTP )
PI 7.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help