PPDB

 The Plant Proteome Database

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AT1G71180.1   6-phosphogluconate dehydrogenase family protein
Lab Annot. 6-phosphogluconate dehydrogenase protein
Mapman: 7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71170.1 11Arabidopsis thaliana5E-17329986900 (0)_
AT4G29120.1 11Arabidopsis thaliana3E-962974967140 (103)M
AT1G17650.2 11Arabidopsis thaliana1E-2726229500 (0)_
Os05g49070.1 7Oryza sativa2E-9630152690 (0)_
Os01g53910.1 7Oryza sativa3E-86293496715 (15)M
Os01g39270.1 7Oryza sativa3E-27263285040 (40)C
Zm00001eb343850_P001 agpv5Zea mays2E-9230352670 (0)_
v1_GRMZM2G413647_P01 4a53Zea mays9E-9230352673 (3)_
GRMZM2G413647_P01 3.21Zea mays9E-92303526718 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2-Hacid_dh_C(1) 3HCDH_N(1) ApbA(1) F420_oxidored(1) NAD_binding_11(1) NAD_bindin
TargetP: Cytoplasm (Class 3 C0.121; M0.067; S0.216; _0.637)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 318 aa (-cTP 301)
Molecular Weight 33.38 kDA(-cTP )
PI 6.34(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help