PPDB

The Plant Proteome Database

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AT1G71110.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G12400.1 11Arabidopsis thaliana1E-13348044620 (0)S
AT2G25270.1 11Arabidopsis thaliana3E-13154439600 (0)S
AT1G80540.3 11Arabidopsis thaliana2E-9846636560 (0)M
Os01g03110.1 7Oryza sativa8E-15049646640 (0)S
Os02g55590.1 7Oryza sativa2E-135500436312 (12)S
Os02g55590.2 7Oryza sativa2E-11639844655 (5)M
Zm00001eb125860_P001 agpv5Zea mays3E-14145948640 (0)S
v1_GRMZM2G130868_P01 4a53Zea mays3E-14145948640 (0)S
GRMZM2G130868_P01 3.21Zea mays3E-14145948640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4064(3) Shisa(2) Tetraspanin(3) Wzy_C(3)
TargetP: Secreted (Class 1 C0.059; M0.037; S0.923; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 557 aa (-cTP 529)
Molecular Weight 61.47 kDA(-cTP )
PI 5.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help