PPDB

The Plant Proteome Database

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AT1G71080.1   RNA polymerase II transcription elongation factor

Lab Annot. RNA polymerase II transcription elongation factor
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38050.1 11Arabidopsis thaliana1E-5527542580 (0)_
Os01g32300.2 7Oryza sativa2E-8228451670 (0)C
Os01g32300.1 7Oryza sativa7E-8228650660 (0)C
Zm00001eb217130_P001 agpv5Zea mays2E-8028451670 (0)C
AC213463.3_FGP002 3.21Zea mays2E-8028451670 (0)C
GRMZM2G080764_P01 3.21Zea mays3E-7728151670 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: EAF(1) FlxA(2)
TargetP: Cytoplasm (Class 2 C0.183; M0.091; S0.055; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 326 aa (-cTP 273)
Molecular Weight 34.83 kDA(-cTP )
PI 4.68(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1751Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help