PPDB

The Plant Proteome Database

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AT1G70940.1   Auxin efflux carrier family protein

Lab Annot. Auxin efflux carrier protein
Mapman: 17.2.2 hormone metabolism.auxin.signal transduction
Curated Location
TAIR curated location: plasma membrane & lateral plasma membrane & vesicle membrane & cell surface (sensu Magnoliophyta)11845211,16731587
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G23080.1 11Arabidopsis thaliana064484880 (0)S
AT1G23080.4 11Arabidopsis thaliana064484880 (0)S
AT1G23080.3 11Arabidopsis thaliana064484880 (0)S
Os06g12610.1 7Oryza sativa065263720 (0)S
Os02g50960.1 7Oryza sativa065960700 (0)S
Os01g45550.2 7Oryza sativa067762710 (0)S
Zm00001eb254390_P003 agpv5Zea mays065660710 (0)S
v1_GRMZM2G074267_P01 4a53Zea mays065660715 (5)S
GRMZM2G074267_P01 3.21Zea mays065660716 (6)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Mem_trans(1)
TargetP: Secreted (Class 3 C0.001; M0.071; S0.772; _0.285)
Predotar:
Subcel. Location:
TM-HMM prediction: 9 TMs
Aramemnon: 10 TMs
TAT position:
Length 640 aa (-cTP 567)
Molecular Weight 69.47 kDA(-cTP )
PI 8.43(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help