PPDB

PPDB	The Plant Proteome Database

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AT1G70610.1 transporter associated with antigen processing protein 1

Lab Annot.

ABC protein - transmembrane
Mapman: 34.8 transport.metabolite transporters at the envelope membrane

Curated Location

envelope-inner-integral (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G70610.2 11 Arabidopsis thaliana 0 507 100 100 0 (0) M
AT5G39040.1 11 Arabidopsis thaliana 2E-102 584 34 54 1 (1) _
AT1G28010.1 11 Arabidopsis thaliana 4E-89 497 38 59 0 (0) _
Os01g68330.1 7 Oryza sativa 3E-150 323 66 81 3 (3) _
Os03g54790.1 7 Oryza sativa 5E-115 610 35 56 5 (5) M
Os01g50100.1 7 Oryza sativa 7E-89 511 36 56 0 (0) _
Zm00001eb143700_P003 agpv5 Zea mays 0 666 63 77 0 (0) C
Zm00001eb143700_P002 agpv5 Zea mays 0 415 66 84 0 (0) M
Zm00001eb143700_P001 agpv5 Zea mays 0 415 66 84 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_14(2) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_25(2) AAA
TargetP:	Chloroplast (Class 3 C0.874; M0.451; S0.001; _0.035)
Predotar:
Subcel. Location:	Thylakoid membrane
TM-HMM prediction:	3 TMs
Aramemnon:	4 TMs
TAT position:
Length	700 aa (-cTP 641) (-lTP 632)
Molecular Weight	78.04 kDA(-cTP 71.22)(-lTP 70.42)
PI	8.68(-cTP 6.42)(-lTP 6.430)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data