PPDB

The Plant Proteome Database

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AT1G70610.1   transporter associated with antigen processing protein 1

Lab Annot. ABC protein - transmembrane
Mapman: 34.8 transport.metabolite transporters at the envelope membrane
Curated Location envelope-inner-integral (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70610.2 11Arabidopsis thaliana05071001000 (0)M
AT5G39040.1 11Arabidopsis thaliana2E-10258434541 (1)_
AT1G28010.1 11Arabidopsis thaliana4E-8949738590 (0)_
Os01g68330.1 7Oryza sativa3E-15032366813 (3)_
Os03g54790.1 7Oryza sativa5E-11561035565 (5)M
Os01g50100.1 7Oryza sativa7E-8951136560 (0)_
Zm00001eb143700_P003 agpv5Zea mays066663770 (0)C
Zm00001eb143700_P002 agpv5Zea mays041566840 (0)M
Zm00001eb143700_P001 agpv5Zea mays041566840 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(2) AAA_14(2) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_25(2) AAA
TargetP: Chloroplast (Class 3 C0.874; M0.451; S0.001; _0.035)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 700 aa (-cTP 641) (-lTP 632)
Molecular Weight 78.04 kDA(-cTP 71.22)(-lTP 70.42)
PI 8.68(-cTP 6.42)(-lTP 6.430)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


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