PPDB

PPDB	The Plant Proteome Database

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AT1G70500.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G23460.1 11 Arabidopsis thaliana 0 454 73 84 0 (0) S
AT1G23460.2 11 Arabidopsis thaliana 0 445 74 85 0 (0) _
AT1G80170.1 11 Arabidopsis thaliana 7E-121 397 45 63 2 (0) S
Os02g03750.1 7 Oryza sativa 3E-159 379 57 72 0 (0) M
Os05g46510.1 7 Oryza sativa 1E-122 392 45 62 0 (0) S
Os07g10740.1 7 Oryza sativa 2E-112 395 44 61 0 (0) S
Zm00001eb231160_P001 agpv5 Zea mays 4E-162 387 57 72 0 (0) S
GRMZM5G831200_P01 3.21 Zea mays 4E-162 387 57 72 0 (0) S
Zm00001eb231160_P002 agpv5 Zea mays 1E-148 381 55 70 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Glyco_hydro_28(1) NosD(2) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.020; M0.020; S0.980; _0.072)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	468 aa (-cTP 453)
Molecular Weight	50.90 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data