PPDB

 The Plant Proteome Database

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AT1G70370.1   polygalacturonase 2
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70370.2 11Arabidopsis thaliana06261001000 (0)S
AT1G23760.1 11Arabidopsis thaliana062779880 (0)M
AT1G60390.1 11Arabidopsis thaliana062765760 (0)S
Os08g29200.1 7Oryza sativa061551630 (0)S
Os09g16010.1 7Oryza sativa2E-16261345590 (0)M
Os10g26940.1 7Oryza sativa7E-8422654720 (0)S
v1_GRMZM2G146665_P01 4a53Zea mays061848630 (0)C
Zm00001eb178490_P001 agpv5Zea mays062049620 (0)M
Zm00001eb178490_P002 agpv5Zea mays062049620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BURP(1)
TargetP: Secreted (Class 1 C0.004; M0.041; S0.914; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 626 aa (-cTP 586)
Molecular Weight 68.06 kDA(-cTP )
PI 8.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help