PPDB

The Plant Proteome Database

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AT1G70280.1   NHL domain-containing protein

Lab Annot. NHL domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70280.2 11Arabidopsis thaliana04471001000 (0)S
AT1G23880.1 11Arabidopsis thaliana045472780 (0)S
AT1G23880.2 11Arabidopsis thaliana045472780 (0)_
Os02g49770.1 7Oryza sativa2E-15945557700 (0)S
Os06g15820.1 7Oryza sativa4E-15641556710 (0)M
Os02g13950.1 7Oryza sativa2E-6843237530 (0)S
Zm00001eb189950_P002 agpv5Zea mays6E-15443456690 (0)_
v1_GRMZM2G125455_P03 4a53Zea mays1E-15343456700 (0)M
Zm00001eb189950_P005 agpv5Zea mays1E-15343456700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cpn10(2) G6PD_N(1) NHL(4) SBBP(1) TFIIA(1) TMEM154(1)
TargetP: Cytoplasm (Class 2 C0.143; M0.070; S0.104; _0.763)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 447 aa (-cTP 438)
Molecular Weight 50.30 kDA(-cTP )
PI 6.44(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help