PPDB

The Plant Proteome Database

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AT1G70220.1   RNA-processing%2C Lsm domain-containing protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70220.2 11Arabidopsis thaliana2E-12722481820 (0)_
AT1G24050.1 11Arabidopsis thaliana4E-54229445821 (15)_
Os02g50830.1 7Oryza sativa6E-23213294924 (24)_
v1_GRMZM2G415327_P05 4a53Zea mays2E-26216315016 (16)_
Zm00001eb254250_P001 agpv5Zea mays2E-2621631500 (0)_
GRMZM2G415327_P05 3.21Zea mays2E-26216315018 (18)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AD(1) bCoV_NS7B(1)
TargetP: Cytoplasm (Class 2 C0.073; M0.179; S0.036; _0.929)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 224 aa (-cTP 216)
Molecular Weight 25.19 kDA(-cTP )
PI 8.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help