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AT1G70200.1
RNA-binding (RRM/RBD/RNP motifs) family protein
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| Lab Annot. |
RBD1- RNA recognition motif (RRM) protein
Mapman: 27.4 RNA.RNA binding |
| Curated Location |
plastid stroma (Pubmed: 23198870 18431481 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
RRM_1(1) |
| TargetP: |
Chloroplast (Class 1 C0.896; M0.089; S0.034; _0.006) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
538 aa (-cTP 489) |
| Molecular Weight |
60.34 kDA(-cTP 54.99) |
| PI |
5.06(-cTP 4.87) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 541 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >1 MDa stroma | wild-type |
| 542 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >500 kDa (HMB) | wild-type |
| 543 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >600 kDa (HMA) | wild-type |
| 640 | Detail | | | | | | | | leaf [A. thaliana] | plastid nucleoid | wild-type |
| 1178 | Detail | | | | | | | | leaf [A. thaliana] | co-IP RH3 stroma | clpr2-1 |
| 1179 | Detail | | | | | | | | leaf [A. thaliana] | co-IP ClpR2 stroma | clpr2-1 |
| 1196 | Detail | | | | | | | | leaf [A. thaliana] | co-IP RH3 stroma | clpr2-1 |
| 1392 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1401 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1403 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1454 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 2) |
| 1482 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 1) |
| 1484 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 2) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1528 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1635 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | clpt1-2 |
| 1636 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | clpt1-2 |
| 1637 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue stroma | Wild-type |
| 1638 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue stroma | Wild-type |
| 1639 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue stroma | clpt2-1 |
| 1640 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue stroma | clpt2-1 |
| 1670 | Detail | | | | | | | | [A. thaliana] | | |
| 1672 | Detail | | | | | | | | [A. thaliana] | | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18431481(chloroplast)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19525416(leaf (wt and clpr4-1 mutant))
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Comparative Proteomics Data
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