PPDB

PPDB	The Plant Proteome Database

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AT1G69940.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.8.1 cell wall.pectin*esterases.PME

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G07410.1 11 Arabidopsis thaliana 0 361 96 98 0 (0) S
AT5G61680.1 11 Arabidopsis thaliana 0 364 75 85 1 (1) S
AT5G07420.1 11 Arabidopsis thaliana 0 362 66 82 0 (0) S
Os05g44600.1 7 Oryza sativa 3E-81 344 38 57 0 (0) S
Os12g37660.1 7 Oryza sativa 1E-79 322 42 59 0 (0) C
Os01g53990.1 7 Oryza sativa 4E-79 298 40 61 0 (0) S
Zm00001eb153600_P002 agpv5 Zea mays 3E-81 307 40 61 0 (0) M
GRMZM2G120779_P01 3.21 Zea mays 5E-81 316 39 60 0 (0) S
v1_GRMZM2G120779_P01 4a53 Zea mays 5E-81 316 39 60 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1565(1) Glyco_trans_1_3(1) Pectate_lyase_3(1) Pectinesterase(1) PsbL(2)
TargetP:	Secreted (Class 2 C0.030; M0.023; S0.838; _0.152)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	361 aa (-cTP 339)
Molecular Weight	39.14 kDA(-cTP )
PI	8.74(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
19546170(mature pollen grains)

Comparative Proteomics Data