PPDB

The Plant Proteome Database

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AT1G69530.5   expansin A1

Lab Annot. ATEXPA1 (EXPANSIN A1)
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G69530.3 11Arabidopsis thaliana1E-17627589895 (5)S
AT1G69530.4 11Arabidopsis thaliana6E-16022098985 (5)S
AT1G69530.2 11Arabidopsis thaliana1E-155240899119 (10)S
Os05g39990.1 7Oryza sativa7E-11322868800 (0)M
Os01g60770.1 7Oryza sativa2E-11020472830 (0)S
Os02g51040.1 7Oryza sativa8E-11022171800 (0)S
GRMZM2G361064_P01 3.21Zea mays3E-11218679904 (1)S
v1_GRMZM2G361064_P02 4a53Zea mays3E-11218679907 (7)S
v1_GRMZM2G105844_P01 4a53Zea mays5E-11122172800 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) DUF5348(1) Expansin_C(1)
TargetP: Secreted (Class 4 C0.035; M0.093; S0.538; _0.261)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 245 aa (-cTP 162)
Molecular Weight 26.21 kDA(-cTP )
PI 9.28(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help