PPDB

 The Plant Proteome Database

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AT1G69410.1   eukaryotic elongation factor 5A-3
Lab Annot. eukaryotic translation initiation factor 5A, putative / eIF-5A, putative
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13950.1 11Arabidopsis thaliana9E-10215887941 (1)_
AT1G26630.1 11Arabidopsis thaliana1E-1001568795373 (202)_
AT1G26630.2 11Arabidopsis thaliana2E-81126899592 (86)_
Os03g55150.4 7Oryza sativa2E-98160859344 (44)_
Os03g55150.6 7Oryza sativa2E-98160859320 (20)_
Os12g32240.1 7Oryza sativa8E-98160849536 (36)_
GRMZM2G144030_P01 3.21Zea mays3E-941608190189 (123)_
v1_GRMZM2G144030_P01 4a53Zea mays3E-941608190118 (117)_
Zm00001eb326630_P002 agpv5Zea mays3E-9416081900 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: EFP_N(1) eIF-5a(1)
TargetP: Cytoplasm (Class 1 C0.101; M0.089; S0.055; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 158 aa (-cTP 115)
Molecular Weight 17.21 kDA(-cTP )
PI 5.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
2046Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2051Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2072Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16

* For details about the exprimental sources click here.

Published Proteomics Data

 16400686(floem_sap B. napa)
18814325(cotyledons)
19525416(leaf (wt and clpr4-1 mutant))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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