PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G69410.1 eukaryotic elongation factor 5A-3

Lab Annot.

eukaryotic translation initiation factor 5A, putative / eIF-5A, putative
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13950.1 11 Arabidopsis thaliana 9E-102 158 87 94 1 (1) _
AT1G26630.1 11 Arabidopsis thaliana 1E-100 156 87 95 364 (207) _
AT1G26630.2 11 Arabidopsis thaliana 2E-81 126 89 95 92 (87) _
Os03g55150.4 7 Oryza sativa 2E-98 160 85 93 44 (44) _
Os03g55150.6 7 Oryza sativa 2E-98 160 85 93 20 (20) _
Os12g32240.1 7 Oryza sativa 8E-98 160 84 95 36 (36) _
GRMZM2G144030_P01 3.21 Zea mays 3E-94 160 81 90 189 (123) _
v1_GRMZM2G144030_P01 4a53 Zea mays 3E-94 160 81 90 118 (117) _
Zm00001eb326630_P002 agpv5 Zea mays 3E-94 160 81 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	EFP_N(1) eIF-5a(1)
TargetP:	Cytoplasm (Class 1 C0.101; M0.089; S0.055; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	158 aa (-cTP 115)
Molecular Weight	17.21 kDA(-cTP )
PI	5.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
311	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-his6
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
2046	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2047	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2051	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2054	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2068	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2072	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2073	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16
2316	Detail								leaf [A. thaliana]	PG plastoglobule
2318	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

16400686(floem_sap B. napa)
18814325(cotyledons)
19525416(leaf (wt and clpr4-1 mutant))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data