PPDB

PPDB	The Plant Proteome Database

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AT1G69330.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29270.1 11 Arabidopsis thaliana 3E-88 283 47 63 0 (0) _
AT3G29270.2 11 Arabidopsis thaliana 3E-88 283 47 63 0 (0) _
AT1G74370.1 11 Arabidopsis thaliana 6E-66 279 41 57 0 (0) _
Os03g31320.1 7 Oryza sativa 8E-91 273 51 65 0 (0) _
Os03g31320.2 7 Oryza sativa 8E-91 273 51 65 0 (0) _
Os03g11260.1 7 Oryza sativa 2E-84 277 50 64 0 (0) C
Zm00001eb393270_P001 agpv5 Zea mays 3E-92 277 51 64 0 (0) M
v1_GRMZM2G162949_P01 4a53 Zea mays 3E-92 277 51 64 0 (0) M
GRMZM2G162949_P01 3.21 Zea mays 3E-92 277 51 64 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2207(1) E3_UbLigase_R4(1) FYVE(1) Prok-RING_4(2) zf-C3HC4(1) zf-C3HC4_2(1) zf
TargetP:	Cytoplasm (Class 4 C0.242; M0.121; S0.140; _0.475)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	270 aa (-cTP 241)
Molecular Weight	30.42 kDA(-cTP )
PI	7.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data