PPDB

The Plant Proteome Database

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AT1G69230.1   SPIRAL1-like2

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G69230.2 11Arabidopsis thaliana7E-751101001009 (6)M
AT1G26355.1 11Arabidopsis thaliana1E-4611169790 (0)M
AT2G03680.3 11Arabidopsis thaliana1E-2911955620 (0)_
Os12g31780.1 7Oryza sativa2E-309555690 (0)M
Os12g31780.2 7Oryza sativa2E-309555690 (0)M
Os11g41150.1 7Oryza sativa6E-245472870 (0)M
Zm00001eb166450_P002 agpv5Zea mays3E-2510953620 (0)M
v1_GRMZM2G165461_P01 4a53Zea mays3E-2510953621 (1)M
GRMZM2G165461_P01 3.21Zea mays3E-2510953625 (5)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LPP20(1)
TargetP: Mitochondria (Class 5 C0.087; M0.475; S0.031; _0.356)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 110 aa (-cTP 50)
Molecular Weight 10.88 kDA(-cTP )
PI 6.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2166Detail       leaf [A. thaliana] stroma Clp stromaP5 trap-strepII
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2250Detail       seedlings [A. thaliana] total tissue atg5
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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