PPDB

PPDB	The Plant Proteome Database

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AT1G68890.1 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein

Lab Annot.

SHCHC synthase (menD) (plastid or mitochondrial)
Mapman: 18.5.2 Co-factor and vitamine metabolism.folate & vitamine K.vitamine K; 26.57* misc.alpha/beta-Hydrolase family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G68890.2 11 Arabidopsis thaliana 0 1371 100 100 0 (0) _
AT1G18870.2 11 Arabidopsis thaliana 1E-19 204 32 50 0 (0) _
AT1G18870.3 11 Arabidopsis thaliana 2E-19 204 32 50 0 (0) C
Os02g37090.1 7 Oryza sativa 2E-70 246 46 69 0 (0) _
Os09g19734.2 7 Oryza sativa 7E-14 199 29 47 50 (50) _
Os09g19734.1 7 Oryza sativa 8E-14 199 29 47 50 (50) _
Zm00001eb245360_P004 agpv5 Zea mays 0 962 43 63 0 (0) C
Zm00001eb245360_P003 agpv5 Zea mays 0 846 44 64 0 (0) _
Zm00001eb245360_P002 agpv5 Zea mays 0 699 48 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_1(1) Abhydrolase_2(1) Abhydrolase_3(1) Abhydrolase_6(1) BAAT_C(1) DL
TargetP:	Chloroplast (Class 3 C0.936; M0.350; S0.008; _0.014)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1715 aa (-cTP 1696) (-lTP 766)
Molecular Weight	190.18 kDA(-cTP 188.04)(-lTP 84.87)
PI	6.13(-cTP 6.08)(-lTP 6.076)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1744	Detail								[A. thaliana]		Mep-6
2216	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data