PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G68830.1   Serine/Threonine kinase domain protein
Lab Annot. STN7 kinase state transition thylakoid
Mapman: 1.1.30 PS.lightreaction.state transition; 29.4.1 protein.postranslational modification.kinase
Curated Location thylakoid-integral (Pubmed: 23198870 12624266 18431481 ) (supported by in-house exprements)

TAIR curated location: chloroplast15729347
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01920.1 11Arabidopsis thaliana1E-89404426075 (70)C
AT5G01920.2 11Arabidopsis thaliana1E-8940442600 (0)C
AT2G38620.2 11Arabidopsis thaliana9E-1634027410 (0)_
Os05g47560.1 7Oryza sativa0534768826 (26)C
Os05g40180.1 7Oryza sativa4E-91407405735 (35)C
Os08g40170.1 7Oryza sativa2E-1333926410 (0)_
GRMZM2G010349_P02 3.21Zea mays0513789056 (52)C
Zm00001eb294720_P001 agpv5Zea mays0513789012 (12)C
v1_GRMZM2G010349_P01 4a53Zea mays0317809017 (17)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APH(1) FTA2(2) Kdo(1) PK_Tyr_Ser-Thr(1) Pkinase(1) Pkinase_fungal(1)
TargetP: Chloroplast (Class 3 C0.740; M0.141; S0.048; _0.224)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 562 aa (-cTP 517) (-lTP 467)
Molecular Weight 63.25 kDA(-cTP 58.53)(-lTP 53.39)
PI 9.37(-cTP 9.14)(-lTP 9.298)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1331Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1494Detail       leaf [A. thaliana]  
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1552Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1625Detail       Rosettes [A. thaliana] Wild-type
1626Detail       Rosettes [A. thaliana] k1xk3
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1628Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1629Detail       Rosettes [A. thaliana] Wild-type
1630Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type
1675Detail       Rosettes [A. thaliana]  
1676Detail       Rosettes [A. thaliana]  
1678Detail       Rosettes [A. thaliana]  
1694Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1696Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1707Detail        [A. thaliana] sht1
1708Detail        [A. thaliana] Wild-type
1709Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1711Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1713Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1714Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1715Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1832Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1934Detail       leaf [A. thaliana] chloroplast wild-type
1936Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help