PPDB

 The Plant Proteome Database

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AT1G68820.1   Transmembrane Fragile-X-F-associated protein
Lab Annot. Transmembrane Fragile-X-F-associated protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68820.4 11Arabidopsis thaliana047498980 (0)M
AT1G68820.3 11Arabidopsis thaliana04221001000 (0)M
AT1G68820.2 11Arabidopsis thaliana042898980 (0)M
Os03g49900.1 7Oryza sativa047367790 (0)M
Os10g36880.1 7Oryza sativa6E-084450630 (0)C
GRMZM2G704032_P03 3.21Zea mays048166780 (0)M
v1_GRMZM2G704032_P03 4a53Zea mays048166780 (0)M
Zm00001eb216620_P001 agpv5Zea mays040069790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Prok-RING_4(1) Tmemb_185A(1) zf-C3HC4(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_5(1)
TargetP: Mitochondria (Class 4 C0.008; M0.497; S0.231; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 468 aa (-cTP 409)
Molecular Weight 53.64 kDA(-cTP )
PI 6.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help