PPDB

PPDB	The Plant Proteome Database

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AT1G68790.1 little nuclei3

Lab Annot.

LINC3 (LITTLE NUCLEI3)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13220.3 11 Arabidopsis thaliana 0 1038 43 60 0 (0) M
AT1G13220.2 11 Arabidopsis thaliana 0 1007 43 61 0 (0) _
AT1G67230.1 11 Arabidopsis thaliana 7E-174 1172 35 55 35 (28) M
Os02g48010.1 7 Oryza sativa 9E-85 877 30 54 23 (23) M
Os01g56140.1 7 Oryza sativa 4E-48 826 27 51 6 (6) _
Zm00001eb188670_P001 agpv5 Zea mays 1E-87 818 32 57 0 (0) M
Zm00001eb188670_P003 agpv5 Zea mays 1E-87 818 32 57 0 (0) M
Zm00001eb188670_P002 agpv5 Zea mays 1E-87 818 32 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RNase_Y_N(4)
TargetP:	Cytoplasm (Class 5 C0.035; M0.590; S0.037; _0.675)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1085 aa (-cTP 1081)
Molecular Weight	127.20 kDA(-cTP )
PI	5.27(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
17272265(ubiquinated proteins (suspension cells))
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data