PPDB

The Plant Proteome Database

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AT1G68260.1   Thioesterase superfamily protein

Lab Annot. acyl-lipid thioesterase 3 (ALT3)
Mapman: 11.9 lipid metabolism.lipid degradation
Curated Location plastid (Pubmed: 23198870 24214063 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68280.1 11Arabidopsis thaliana5E-11219381860 (0)M
AT1G35290.1 11Arabidopsis thaliana1E-10018476840 (0)C
AT1G35250.1 11Arabidopsis thaliana2E-9318471790 (0)M
Os04g46730.1 7Oryza sativa6E-5913863760 (0)C
Os04g46730.3 7Oryza sativa1E-4913857710 (0)C
Os04g46710.1 7Oryza sativa5E-3913844650 (0)C
v1_GRMZM2G077811_P02 4a53Zea mays5E-60198516410 (10)C
GRMZM2G077811_P02 3.21Zea mays5E-6019851647 (7)C
Zm00001eb074540_P001 agpv5Zea mays4E-5913663770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 4HBT(1) 4HBT_2(1) Acyl-ACP_TE(2)
TargetP: Chloroplast (Class 5 C0.434; M0.370; S0.187; _0.046)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 190 aa (-cTP 139)
Molecular Weight 21.54 kDA(-cTP 15.95)
PI 9.27(-cTP 6.59)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


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