PPDB

The Plant Proteome Database

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AT1G68220.1   aerobic coproporphyrinogen-III oxidase (DUF1218)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52910.1 11Arabidopsis thaliana1E-3617041580 (0)S
AT3G15480.1 11Arabidopsis thaliana1E-3617242590 (0)S
AT1G13380.1 11Arabidopsis thaliana2E-3518239590 (0)S
Os08g16130.1 7Oryza sativa1E-5216353720 (0)S
Os09g10910.3 7Oryza sativa3E-4018240600 (0)S
Os09g10910.2 7Oryza sativa3E-4018240600 (0)S
Zm00001eb178030_P001 agpv5Zea mays2E-5618353700 (0)S
v1_GRMZM2G029184_P01 4a53Zea mays2E-5618353700 (0)S
GRMZM2G029184_P01 3.21Zea mays2E-5618353700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1218(2) DUF4949(1)
TargetP: Secreted (Class 1 C0.010; M0.109; S0.914; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 201 aa (-cTP 136)
Molecular Weight 21.41 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help