PPDB

PPDB	The Plant Proteome Database

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AT1G68070.1 Zinc finger%2C C3HC4 type (RING finger) family protein

Lab Annot.

Zinc finger, C3HC4 type (RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G01735.1 11 Arabidopsis thaliana 4E-154 354 59 71 0 (0) C
AT3G61180.1 11 Arabidopsis thaliana 2E-110 331 50 65 0 (0) C
AT4G11680.1 11 Arabidopsis thaliana 2E-109 346 51 66 0 (0) C
Os02g45240.1 7 Oryza sativa 2E-106 326 53 68 0 (0) C
Os04g48050.1 7 Oryza sativa 1E-99 316 52 68 0 (0) _
Os07g27950.2 7 Oryza sativa 1E-93 317 53 64 0 (0) C
v1_GRMZM2G181519_P02 4a53 Zea mays 8E-125 342 55 70 0 (0) C
v1_GRMZM2G181519_P01 4a53 Zea mays 8E-125 342 55 70 0 (0) C
Zm00001eb253840_P004 agpv5 Zea mays 8E-125 342 55 70 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Popeye(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-rb
TargetP:	Chloroplast (Class 1 C0.969; M0.079; S0.006; _0.082)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	343 aa (-cTP 295) (-lTP 208)
Molecular Weight	38.30 kDA(-cTP 33.19)(-lTP 23.12)
PI	5.20(-cTP 4.76)(-lTP 4.465)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data