PPDB

 The Plant Proteome Database

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AT1G67950.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G67950.3 11Arabidopsis thaliana027999992 (2)_
AT1G67950.2 11Arabidopsis thaliana027898992 (2)_
AT1G67950.4 11Arabidopsis thaliana2E-1602191001002 (2)_
Os03g50560.1 7Oryza sativa8E-9327253725 (5)_
Os04g50790.1 7Oryza sativa3E-8024550720 (0)_
Os06g02240.1 7Oryza sativa3E-7922655738 (8)_
GRMZM2G127559_P01 3.21Zea mays2E-9227153710 (0)_
v1_GRMZM2G127559_P01 4a53Zea mays2E-9227153710 (0)_
Zm00001eb055110_P003 agpv5Zea mays2E-9227153710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Nup35_RRM_2(1) RRM_1(1) RRM_3(1)
TargetP: Cytoplasm (Class 3 C0.273; M0.062; S0.111; _0.773)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 278 aa (-cTP 238)
Molecular Weight 29.88 kDA(-cTP )
PI 5.27(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help