PPDB

The Plant Proteome Database

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AT1G67830.1   alpha-fucosidase 1

Lab Annot. ATFXG1 (ALPHA-FUCOSIDASE 1); alpha-L-fucosidase/ carboxylesterase
Mapman: 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26430.1 11Arabidopsis thaliana1E-15735959740 (0)S
AT5G14450.1 11Arabidopsis thaliana6E-121382506310 (10)S
AT3G27950.1 11Arabidopsis thaliana9E-10137045601 (1)S
Os07g39750.1 7Oryza sativa2E-14635658725 (5)S
Os07g39740.1 7Oryza sativa2E-13735655690 (0)M
Os05g33270.1 7Oryza sativa8E-9934144632 (2)S
Zm00001eb325910_P001 agpv5Zea mays3E-14634258740 (0)S
v1_GRMZM2G108158_P01 4a53Zea mays3E-146342587413 (13)S
AC212068.4_FGP005 3.21Zea mays2E-9734744630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 2 C0.191; M0.023; S0.853; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 317)
Molecular Weight 40.46 kDA(-cTP )
PI 8.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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