PPDB

PPDB	The Plant Proteome Database

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AT1G67750.1 Pectate lyase family protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63180.1 11 Arabidopsis thaliana 0 412 75 84 40 (9) M
AT4G24780.1 11 Arabidopsis thaliana 0 411 77 87 57 (13) S
AT4G24780.2 11 Arabidopsis thaliana 0 411 77 87 53 (9) S
Os04g05050.1 7 Oryza sativa 0 381 77 86 0 (0) S
Os04g05050.2 7 Oryza sativa 0 375 76 86 0 (0) _
Os10g31910.1 7 Oryza sativa 2E-176 382 62 75 0 (0) S
Zm00001eb420010_P002 agpv5 Zea mays 0 381 76 86 0 (0) C
v1_GRMZM2G412207_P02 4a53 Zea mays 0 362 78 87 0 (0) _
v1_GRMZM2G131912_P01 4a53 Zea mays 0 389 75 85 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.024; M0.053; S0.969; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	408 aa (-cTP 372)
Molecular Weight	44.89 kDA(-cTP )
PI	8.84(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data