PPDB

PPDB	The Plant Proteome Database

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AT1G67650.1 SRP72 RNA-binding domain-containing protein

Lab Annot.

SRP72 RNA-binding domain
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G67680.1 11 Arabidopsis thaliana 0 650 85 90 29 (16) _
Os01g66560.1 7 Oryza sativa 0 683 52 69 24 (24) S
Zm00001eb145240_P002 agpv5 Zea mays 0 676 52 67 0 (0) _
GRMZM2G070562_P01 3.21 Zea mays 0 678 50 66 74 (29) _
v1_GRMZM2G439400_P01 4a53 Zea mays 4E-161 543 53 70 34 (34) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(4) PAXIP1_C(1) PPR(3) putAbiC(1) SRP_TPR_like(2) SRP72(1) TPR_1(3) TPR_14
TargetP:	Cytoplasm (Class 2 C0.056; M0.152; S0.125; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	651 aa (-cTP 647)
Molecular Weight	71.82 kDA(-cTP )
PI	8.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data