PPDB

The Plant Proteome Database

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AT1G67560.1   PLAT/LH2 domain-containing lipoxygenase family protein

Lab Annot. PLAT/LH2 domain-containing lipoxygenase protein
Mapman: 17.7.1.2 hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72520.1 11Arabidopsis thaliana0920506723 (22)C
AT1G17420.1 11Arabidopsis thaliana0841526913 (13)C
AT3G45140.1 11Arabidopsis thaliana081348641888 (1541)C
Os03g08220.1 7Oryza sativa085350680 (0)M
Os02g10120.1 7Oryza sativa0835476426 (26)C
Os08g39850.1 7Oryza sativa083047650 (0)C
Zm00001eb005920_P001 agpv5Zea mays084849670 (0)M
GRMZM2G017616_P01 3.21Zea mays084849674 (4)M
v1_GRMZM2G017616_P01 4a53Zea mays084849674 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2312(1) DUF4924(2) Lipoxygenase(1) PLAT(1)
TargetP: Chloroplast (Class 2 C0.822; M0.111; S0.097; _0.050)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 917 aa (-cTP 877)
Molecular Weight 104.51 kDA(-cTP 100.09)
PI 7.89(-cTP 6.59)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1933Detail       leaf [A. thaliana] chloroplast wild-type
1934Detail       leaf [A. thaliana] chloroplast wild-type
1935Detail       leaf [A. thaliana] chloroplast wild-type
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
17216043(leaf)
19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help