PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G67140.1   HEAT repeat-containing protein

Lab Annot. unknown protein HEAT domains
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G67140.2 11Arabidopsis thaliana02222999921 (14)_
AT1G67140.3 11Arabidopsis thaliana02222999921 (14)_
Os06g30901.1 7Oryza sativa01131546921 (21)M
Os06g30894.1 7Oryza sativa2E-14696337530 (0)_
Os06g30894.2 7Oryza sativa2E-14499536530 (0)_
Zm00001eb382690_P001 agpv5Zea mays0198751690 (0)_
v1_GRMZM2G356423_P01 4a53Zea mays0146347640 (0)_
v1_GRMZM2G356423_P02 4a53Zea mays079858740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CLASP_N(3) HEAT(6) HEAT_2(4) HEAT_EZ(2)
TargetP: Cytoplasm (Class 5 C0.036; M0.145; S0.470; _0.515)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 4 TMs
TAT position:
Length 2221 aa (-cTP 2195)
Molecular Weight 244.25 kDA(-cTP )
PI 5.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help