PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G67030.1   zinc finger protein 6

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68360.1 11Arabidopsis thaliana2E-3124039461 (1)_
AT3G58070.1 11Arabidopsis thaliana1E-117245610 (0)_
AT5G25160.1 11Arabidopsis thaliana1E-118839550 (0)_
Os01g04120.1 7Oryza sativa7E-207263690 (0)_
Os01g32920.1 7Oryza sativa4E-1718935440 (0)_
Os03g11680.1 7Oryza sativa3E-133876810 (0)_
Zm00001eb380490_P001 agpv5Zea mays8E-2419834510 (0)_
v1_GRMZM2G156950_P01 4a53Zea mays8E-197358640 (0)_
Zm00001eb125240_P001 agpv5Zea mays8E-197358640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-C2H2_4(2) zf-C2H2_6(1)
TargetP: Cytoplasm (Class 4 C0.257; M0.074; S0.041; _0.645)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 197 aa (-cTP 125)
Molecular Weight 21.41 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15821981(crude&pure 80S ribosome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help