PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G66980.1   suppressor of npr1-1 constitutive 4
Lab Annot.
Mapman: 11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66980.2 11Arabidopsis thaliana0114797970 (0)M
AT1G66980.3 11Arabidopsis thaliana0114597970 (0)M
AT1G66980.4 11Arabidopsis thaliana0111898980 (0)M
Os04g39610.1 7Oryza sativa0716506942 (42)S
Os02g37590.1 7Oryza sativa0695496841 (41)S
Os08g39350.1 7Oryza sativa072147654 (4)M
Zm00001eb245640_P002 agpv5Zea mays071348660 (0)S
v1_GRMZM2G013324_P01 4a53Zea mays0713486620 (20)S
GRMZM2G013324_P01 3.21Zea mays0713486628 (26)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2442(2) DUF4381(1) GDPD(3) PK_Tyr_Ser-Thr(1) Pkinase(1) YfmQ(2)
TargetP: Mitochondria (Class 4 C0.013; M0.488; S0.150; _0.049)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 3 TMs
TAT position:
Length 1118 aa (-cTP 1083)
Molecular Weight 123.82 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19888209(leaves)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help