PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G66850.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot.
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38160.1 11Arabidopsis thaliana5E-2910346650 (0)S
AT5G38195.1 11Arabidopsis thaliana1E-2410246630 (0)S
AT5G38170.1 11Arabidopsis thaliana2E-2410344562 (2)S
Os05g47700.1 7Oryza sativa8E-216651720 (0)S
Os03g02050.1 7Oryza sativa8E-196550690 (0)S
Os10g36170.1 7Oryza sativa4E-1866516610 (10)S
Zm00001eb000850_P001 agpv5Zea mays5E-196653680 (0)S
v1_GRMZM2G137329_P01 4a53Zea mays5E-196653683 (3)S
GRMZM2G137329_P01 3.21Zea mays5E-196653680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 5TM-5TMR_LYT(1) LTP_2(1)
TargetP: Secreted (Class 1 C0.017; M0.014; S0.969; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 102 aa (-cTP 43)
Molecular Weight 10.51 kDA(-cTP )
PI 8.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19200160(flower-stage 12)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help