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PPDB	The Plant Proteome Database

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AT1G66730.1 DNA LIGASE 6

Lab Annot.

DNA LIGASE 6
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08130.1 11 Arabidopsis thaliana 7E-165 641 40 61 5 (2) C
AT1G49250.1 11 Arabidopsis thaliana 1E-137 613 39 60 0 (0) _
AT2G45700.1 11 Arabidopsis thaliana 5E-57 336 37 55 0 (0) _
Os01g49180.1 7 Oryza sativa 0 1486 48 64 0 (0) C
Os10g34750.1 7 Oryza sativa 5E-155 639 39 59 23 (23) _
Os10g34750.2 7 Oryza sativa 5E-155 639 39 59 23 (23) _
Zm00001eb156510_P003 agpv5 Zea mays 0 1429 50 67 0 (0) C
Zm00001eb156510_P001 agpv5 Zea mays 0 1242 45 63 0 (0) C
Zm00001eb156510_P004 agpv5 Zea mays 0 1070 44 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DNA_ligase_A_C(1) DNA_ligase_A_M(1) DNA_ligase_A_N(1) DRMBL(1) Lactamase_B_2(1)
TargetP:	Chloroplast (Class 3 C0.901; M0.017; S0.002; _0.320)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1396 aa (-cTP 1322)
Molecular Weight	156.32 kDA(-cTP 148.47)
PI	5.95(-cTP 5.89)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data