PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G66610.1   TRAF-like superfamily protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66610.2 11Arabidopsis thaliana1E-1201741001000 (0)_
AT1G66620.1 11Arabidopsis thaliana1E-8028350600 (0)_
AT1G66630.1 11Arabidopsis thaliana1E-4629738460 (0)_
Os02g03620.1 7Oryza sativa8E-116344600 (0)_
Os07g46560.1 7Oryza sativa1E-108935530 (0)_
Os01g03400.1 7Oryza sativa1E-108145540 (0)S
Zm00001eb231070_P001 agpv5Zea mays3E-116346580 (0)_
v1_GRMZM2G146354_P01 4a53Zea mays3E-116346580 (0)_
GRMZM2G146354_P01 3.21Zea mays3E-116346580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sina(1) zf-C3HC4_2(3) zf-RING_5(3)
TargetP: Cytoplasm (Class 4 C0.389; M0.094; S0.011; _0.589)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 366 aa (-cTP 353)
Molecular Weight 40.79 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help