PPDB

PPDB	The Plant Proteome Database

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AT1G66520.1 formyltransferase

Lab Annot.

formyltetrahydrofolate deformylase/ hydroxymethyl- (DE194)
Mapman: 13.2.3.4 amino acid metabolism.degradation.aspartate family.methionine

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G66520.2 11 Arabidopsis thaliana 0 327 100 100 0 (0) C
AT4G17360.1 11 Arabidopsis thaliana 1E-06 69 36 53 1 (1) M
AT5G47435.2 11 Arabidopsis thaliana 1E-06 107 28 48 3 (1) M
Os01g49330.1 7 Oryza sativa 6E-158 355 62 79 11 (11) M
Os03g01222.4 7 Oryza sativa 9E-07 118 31 46 0 (0) M
Os03g01222.3 7 Oryza sativa 1E-06 118 31 46 0 (0) _
Zm00001eb156380_P003 agpv5 Zea mays 1E-161 353 64 79 0 (0) M
GRMZM2G019437_P01 3.21 Zea mays 1E-161 353 64 79 22 (22) M
v1_GRMZM2G019437_P01 4a53 Zea mays 1E-161 353 64 79 15 (15) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Formyl_trans_C(1) Formyl_trans_N(1)
TargetP:	Chloroplast (Class 4 C0.621; M0.261; S0.017; _0.039)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	355 aa (-cTP 319)
Molecular Weight	38.50 kDA(-cTP 34.58)
PI	9.29(-cTP 8.83)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data