PPDB

The Plant Proteome Database

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AT1G66470.1   ROOT HAIR DEFECTIVE6

Lab Annot. ROOT HAIR DEFECTIVE6
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G37800.1 11Arabidopsis thaliana1E-12432064700 (0)_
AT4G33880.1 11Arabidopsis thaliana8E-258259790 (0)_
AT5G43175.1 11Arabidopsis thaliana1E-2414743590 (0)_
Os02g48060.1 7Oryza sativa2E-5612278840 (0)_
Os01g02110.1 7Oryza sativa2E-4412166800 (0)_
Os06g30090.1 7Oryza sativa5E-3412152690 (0)_
Zm00001eb252360_P001 agpv5Zea mays2E-5014562750 (0)_
AC216731.3_FGP001 3.21Zea mays2E-5014562750 (0)_
v1_AC216731.3_FGP001 4a53Zea mays2E-5014562750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Apt1(2) HLH(1)
TargetP: Cytoplasm (Class 3 C0.277; M0.083; S0.046; _0.807)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 298 aa (-cTP 221)
Molecular Weight 32.09 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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