PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G66320.1   F-box/RNI-like superfamily protein

Lab Annot. F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66640.1 11Arabidopsis thaliana045786880 (0)_
AT1G66300.1 11Arabidopsis thaliana045963790 (0)_
AT1G66290.1 11Arabidopsis thaliana045962770 (0)_
Os04g13010.1 7Oryza sativa4E-1227825450 (0)_
Os07g18600.1 7Oryza sativa5E-1127826400 (0)_
Os04g39080.1 7Oryza sativa5E-1135826400 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) FBD(3) LRR_2(3)
TargetP: Cytoplasm (Class 2 C0.201; M0.064; S0.079; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 457 aa (-cTP 425)
Molecular Weight 52.69 kDA(-cTP )
PI 8.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help